DNA: strain P079F W - SRA

SRX5824548: DNA: strain P079F W
1 ILLUMINA (Illumina HiSeq 2500) run: 1.1M spots, 273.2M bases, 100.6Mb downloads

Design: DNA extracted from pure culture and sent to Sanger centre for sequencing

Submitted by: Nottingham Trent University

Study: Isolation and characterization of lactose-positive Enterobacteriaceae from preterm neonates in Norwich, England

PRJNA471164 • SRP198255 • All experiments • All runs

Faeces of 109 preterm neonates was screened for lactose-positive Enterobacteriaceae using MacConkey agar. Isolates were tentatively identified using API 20E, then characterized fully using whole-genome sequence analyses. Carriage rates were determined for species. Pangenome analysis of K. oxytoca isolates was done, confirming separation of isolates into the three known phylogroups (Ko1, K. michiganensis; Ko2, K. oxytoca; Ko6, K. grimontii). Preprint associated with work https://www.biorxiv.org/content/10.1101/761924v1

Sample: Raoultella ornithinolytica P079F W

SAMN09204091 • SRS4752603 • All experiments • All runs

Organism: Raoultella ornithinolytica

Library:

Name: P079F W

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.1M spots, 273.2M bases, 100.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR9048023	1,092,878	273.2M	100.6Mb	2019-05-13

ID:: 7830266

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